MUSE Pipeline Reference Manual
2.1.1
Main Page
Modules
Data Structures
Files
Modules
Here is a list of all modules:
Artifact handling
Astronomical tools
Basic-processing function
Combination of images
CPL wrappers
DAR (Differential Atmospheric Refraction)
External FITS table formats
Datacube handling
2D Source Detection
Flux calibration
Geometrical calibration
ESO science data product format support
Image handling for the MUSE format
Imagelist processing for the four-extension image format
Line Spread Function related functions
Mask handling
Protected access to FITS headers
Physics functions for the MUSE pipeline
Pixel grid
Pixel table handling
Post-processing functions
Processing framework
Quadrants and other CCD regions
Quality flag handling
Resampling
Radial velocity corrections
Sky subtraction
Table handling
Tracing
Utilities
Wavelength calibration
World coordinate system (WCS) related functions
Xposure combination
Tool muse_badpix_from_ascii
Tool muse_badpix_from_dq
Tool muse_badpix_from_region
Tool muse_cube_combine
Tool muse_cube_concatenate
Tool muse_cube_filter
muse_cube_filter
: Add filtered images for existing MUSE cubes
Tool muse_fill_image
Tool muse_geo_plot
Tool muse_geo_smooth
Tool muse_image_fwhm
Tool muse_offset_list_create
muse_offset_list_create
: Create (empty) OFFSET_LIST file
Tool muse_pixtable_crop
Tool muse_pixtable_dump
Tool muse_pixtable_erase_slice
Tool muse_product_sign
Tool muse_product_split
Tool muse_products_merge
Tool muse_trace_plot_samples
Tool muse_trace_plot_widths
Tool muse_wave_plot_column
Tool muse_wave_plot_residuals
Recipe muse_ampl: Determine the instrumental throughput from exposures taken with the pico-amplifier / photo diode readings.
Recipe muse_astrometry: Compute an astrometric solution.
Recipe muse_bias: Combine several separate bias images into one master bias file.
Recipe muse_create_sky: Create night sky model from selected pixels of an exposure of empty sky.
Recipe muse_dark: Combine several separate dark images into one master dark file and locate hot pixels.
Recipe muse_exp_align: Create a coordinate offset table to be used to align exposures during exposure combination.
Recipe muse_exp_combine: Combine several exposures into one datacube.
Recipe muse_flat: Combine several separate flat images into one master flat file, trace slice locations, and locate dark pixels.
Recipe muse_geometry: Compute relative location of the slices within the field of view and measure the instrumental PSF on the detectors.
Recipe muse_lingain: Compute the gain and a model of the residual non-linearity for each detector quadrant
Recipe muse_lsf: Compute the LSF
Recipe muse_qi_mask: Create image masks for use with the quick image reconstruction.
Recipe muse_scibasic: Remove the instrumental signature from the data of each CCD and convert them from an image into a pixel table.
Recipe muse_scipost_apply_astrometry: Calibrate astrometry for MUSE pixel tables.
Recipe muse_scipost_calibrate_flux: Calibrate flux for MUSE pixel tables.
Recipe muse_scipost_combine_pixtables: Combine MUSE pixel tables, either from different IFUs, or from different exposures, or both.
Recipe muse_scipost_correct_dar: Apply DAR correction for MUSE pixel tables.
Recipe muse_scipost_correct_rv: Apply RV correction for MUSE pixel tables.
Recipe muse_scipost_make_cube: Make a MUSE cube from a MUSE pixel table.
Recipe muse_scipost_subtract_sky_simple: Subtract night sky spectrum.
Recipe muse_scipost_subtract_sky: Subtract night sky model.
Recipe muse_scipost: Prepare reduced and combined science products.
Recipe muse_standard: Create a flux response curve from a standard star exposure.
Recipe muse_twilight: Combine several twilight skyflats into one cube, compute correction factors for each IFU, and create a smooth 3D illumination correction.
Recipe muse_wavecal: Detect arc emission lines and determine the wavelength solution for each slice.
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